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programme record · log

In motion since July 2026.

A record of the sessions, courses and engagements STaiMIC has delivered, from the earliest to the most recent.

6 pipeline sessions2 open talks1 short course1 conference talk1 public campaign

01 · pipeline series

Paid, hands-on, run in order.

Six sessions, each building on the last. Delivered with Nkiruka Cynthia Efenji, Nextflow Ambassador and former STaiMIC instructor.

  1. S01 · 15 JUL 2026introductoryended

    The Genomic Side of Colorectal Cancer: Somatic Variant Calling with nf-core/sarek

  2. S02 · 22 JUL 2026introductoryended

    Nextflow and nf-core/ampliseq: From Raw Reads to Cancer Microbiome Profiles

  3. S03 · 05 AUG 2026appliedended

    Glass-Box Auditing: Finding Reproducibility Defects in a Nextflow Pipeline

  4. S04 · 12 AUG 2026appliedended

    From Audit to Automation: CI for Your Nextflow Pipeline

  5. S05 · 19 AUG 2026appliedended

    From Biological Question to Nextflow Execution: Foundations for Independent Workflow Building

  6. S06 · 26 AUG 2026advancedended

    Building Your Own nf-core Module From Scratch

02 · open sessions

Free, with the IVPN Network.

  1. 22 AUG 2026introductory · free

    Future-Ready Pharmacists: AI and Bioinformatics Skills

  2. 28 AUG 2026introductory · free

    Translational Pharma Bioinformatics: Bridging Computational Workflows to Strategic Decision-Making

03 · short course · conference · public engagement

Recent milestones.

  1. 29 to 30 SEP 2026short course sponsored by STaiMIC · led by Oscar Echeverri-Muñoz

    HealthSeq-NF Foundations

  2. 14 OCT 2026 · 16:15 CESTvirtual · organised by Seqera · presented by Oscar Echeverri-Muñoz

    Nextflow Summit 2026: HealthSeq-nf, Learning to Build and Troubleshoot Biomedical Workflows

  3. 14 OCT 2026European public movement initiated by the CURTAIN project

    Supporter of Cancer Literacy Day